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SRX26731680: Whole genome sequencing of CRBC isolates
1 ILLUMINA (Illumina NovaSeq 6000) run: 5.6M spots, 1.7G bases, 480.9Mb downloads

Design: WGS of CRBC_G1789
Submitted by: Institute of Genetics and Developmental
Study: Crop root bacterial and viral genome resources unveil novel species and conserved patterns of root microbiomes: culturable bacteria genome resource
show Abstracthide Abstract
Reference genomes of root microbes are essential for metagenomic analyses and mechanistic studies of crop root microbiomes. Combining high-throughput bacterial cultivation with metagenomic sequencing, we systematically constructed crop root bacterial and viral genome collections from wheat, rice, maize and alfalfa. The crop root bacterial genome collection, CRBC, dramatically expands the quantity and phylogenetic diversity of publicly available crop root bacterial genomes. From these data, we identified conserved bacterial functions enriched in root microbiomes across multiple crops and soil sources, and found unexplored bacteria and virus interactions in crop root ecosystems.
Sample: WGS of CRBC_G1789
SAMN44729896 • SRS23221844 • All experiments • All runs
Library:
Name: WGS of CRBC_G1789
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 5.6M spots, 1.7G bases, 480.9Mb
Run# of Spots# of BasesSizePublished
SRR313576265,605,3541.7G480.9Mb2024-11-14

ID:
36111365

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